基于转录组数据的生姜ZoWRKY基因家族鉴定及逆境响应分析

姜玉松, 李洪雷, 李哲馨, 徐晓玉, 李隆云, 黄孟军

Identification and Expression Analysis of the ZoWRKY Family in Stress Responses Based on Transcriptome Data of Ginger (Zingiber officinale Roscoe)

Jiang Yusong, Li Honglei, Li Zhexin, Xu Xiaoyu, Li Longyun, Huang Mengjun

表2 ZoWRKY转录因子氨基酸理化分析

Table 2 Physicochemical analysis of amino acid in ZoWRKY transcription factors

序号 Number 序列ID Sequence ID 类型 Type 理论等电点 PI 相对分子质量 MW (kDa) 氨基酸长度 Amino acid length α-螺旋 α-helix (%) β-折叠 β-fold (%) 其他 Others (%) 1 Zoff119209 Ⅰ 10.02 18 952.62 174 1.72 17.24 81.03 2 Zoff146524 Ⅰ 6.05 47 740.90 433 1.15 15.70 83.14 3 Zoff199075 Ⅰ 5.50 58 838.27 540 1.67 14.81 83.52 4 Zoff210606 Ⅰ 7.36 49 275.37 451 2.22 15.96 81.82 5 Zoff227889 Ⅰ 9.61 31 473.00 281 3.56 20.64 75.80 6 Zoff232809 Ⅰ 5.19 43 100.82 391 2.05 9.97 87.98 7 Zoff238069 Ⅰ 6.63 52 133.52 479 2.92 16.28 80.79 8 Zoff238668 Ⅰ 5.59 60 829.58 537 2.79 16.01 81.19 9 Zoff239268 Ⅰ 6.08 68 096.41 629 2.07 11.76 86.17 10 Zoff244943 Ⅰ 5.93 53 600.22 492 4.27 14.02 81.71 11 Zoff253493 Ⅰ 8.78 59 842.01 551 1.63 12.89 85.48 12 Zoff258147 Ⅰ 6.26 78 055.61 718 3.48 11.56 84.96 13 Zoff284143 Ⅰ 6.70 53 481.19 491 4.07 15.07 80.86 14 Zoff295642 Ⅰ 5.41 75 059.16 690 3.19 11.01 85.80 15 Zoff193573 Ⅱ-a 7.66 17 444.56 151 27.15 12.58 60.26 16 Zoff197334 Ⅱ-a 9.74 32 649.05 307 7.82 13.68 78.50 17 Zoff202059 Ⅱ-a 8.77 23 689.98 208 22.12 16.83 61.06 18 Zoff204548 Ⅱ-a 9.33 24 747.76 218 20.64 14.22 65.14 19 Zoff224514 Ⅱ-a 9.18 22 334.06 198 16.67 13.64 69.70 20 Zoff224526 Ⅱ-a 6.72 22 023.94 199 21.11 16.58 62.31 序号 Number 序列ID Sequence ID 类型 Type 理论等电点 PI 相对分子质量 MW (kDa) 氨基酸长度 Amino acid length α-螺旋 α-helix (%) β-折叠 β-fold (%) 其他 Others (%) 21 Zoff224527 Ⅱ-a 8.64 12 187.19 107 0.00 28.04 71.96 22 Zoff237180 Ⅱ-a 9.26 23 765.91 206 21.36 13.11 65.53 23 Zoff296350 Ⅱ-a 8.76 33 220.01 303 14.52 18.48 67.00 24 Zoff600680 Ⅱ-a 8.61 22 434.71 200 0.00 18.50 81.50 25 Zoff025802 Ⅱ-b 8.49 34 543.18 310 11.29 13.87 74.84 26 Zoff192125 Ⅱ-b 8.78 25 559.49 242 11.16 14.88 73.97 27 Zoff199392 Ⅱ-b 8.74 40 995.52 370 15.95 16.22 67.84 28 Zoff211883 Ⅱ-b 8.69 30 587.88 279 3.23 14.34 82.44 29 Zoff228302 Ⅱ-b 7.79 39 532.76 353 18.98 8.78 72.24 30 Zoff229635 Ⅱ-b 6.97 42 701.98 392 8.42 11.48 80.10 31 Zoff237181 Ⅱ-b 8.14 39 597.65 367 16.62 11.72 71.66 32 Zoff244550 Ⅱ-b 9.31 49 121.07 456 18.20 10.96 70.83 33 Zoff255712 Ⅱ-b 5.85 44 598.95 418 16.51 13.64 69.86 34 Zoff275612 Ⅱ-b 8.28 23 926.18 210 20.95 9.05 70.00 35 Zoff290487 Ⅱ-b 8.99 13 316.46 122 0.82 13.11 86.07 36 Zoff290491 Ⅱ-b 6.07 35 980.81 324 15.43 9.88 74.69 37 Zoff129734 Ⅱ-c 9.79 17 944.08 164 6.71 18.29 75.00 38 Zoff147627 Ⅱ-c 10.04 24 896.67 223 5.38 16.59 78.03 39 Zoff165467 Ⅱ-c 6.65 21 534.40 190 6.32 19.47 74.21 40 Zoff173677 Ⅱ-c 9.20 33 840.50 317 6.62 14.83 78.55 41 Zoff186957 Ⅱ-c 9.60 21 486.76 187 0.00 19.79 80.21 42 Zoff226774 Ⅱ-c 5.96 40 489.58 368 2.45 11.41 86.14 43 Zoff239221 Ⅱ-c 9.51 21 050.93 191 2.62 19.37 78.01 44 Zoff242316 Ⅱ-c 9.51 16 605.34 149 0.00 22.82 77.18 45 Zoff253853 Ⅱ-c 6.01 30 576.87 262 0.00 15.27 84.73 46 Zoff290286 Ⅱ-c 9.93 19 356.01 171 4.09 21.64 74.27 47 Zoff614319 Ⅱ-c 10.14 12 362.28 109 0.00 33.94 66.06 48 Zoff150646 Ⅱ-d 9.87 29 012.97 269 7.06 15.24 77.70 49 Zoff170651 Ⅱ-d 10.12 34 732.26 321 22.12 10.59 67.29 50 Zoff185798 Ⅱ-d 9.98 27 468.14 252 23.41 15.08 61.51 51 Zoff186024 Ⅱ-d 9.55 41 308.75 372 14.78 11.56 73.66 52 Zoff188265 Ⅱ-d 9.75 39 505.83 352 12.78 12.22 75.00 53 Zoff192006 Ⅱ-d 10.18 33 047.28 308 10.71 14.29 75.00 54 Zoff199154 Ⅱ-d 9.85 38 393.36 346 12.43 12.14 75.43 55 Zoff204858 Ⅱ-d 9.77 35 680.37 324 16.98 12.65 70.37 56 Zoff208722 Ⅱ-d 10.15 12 913.60 116 0.00 33.62 66.38 57 Zoff209584 Ⅱ-d 9.95 35 415.23 328 15.85 11.89 72.26 58 Zoff238579 Ⅱ-d 9.63 38 150.32 344 12.50 11.92 75.58 59 Zoff238581 Ⅱ-d 9.71 38 594.60 345 12.75 12.17 75.07 60 Zoff305561 Ⅱ-d 9.90 28 447.66 271 19.93 7.01 73.06 61 Zoff407487 Ⅱ-d 10.13 14 806.36 136 0.00 15.44 84.56 62 Zoff066597 Ⅱ-e 10.86 12 246.39 108 0.93 30.56 68.52 63 Zoff178498 Ⅱ-e 9.69 26 402.19 236 2.54 17.37 80.08 64 Zoff186238 Ⅱ-e 8.34 23 262.53 212 3.77 18.40 77.83 65 Zoff223289 Ⅱ-e 9.23 23 531.70 214 6.54 22.43 71.03 66 Zoff288806 Ⅱ-e 7.00 17 884.78 160 3.75 15.00 81.25 67 Zoff288813 Ⅱ-e 5.39 41 512.52 384 0.78 12.24 86.98 68 Zoff311150 Ⅱ-e 5.77 35 150.65 326 7.98 11.66 80.37 69 Zoff536230 Ⅱ-e 9.41 16 935.56 148 6.08 14.86 79.05 70 Zoff109660 Ⅲ 7.71 29 460.72 261 21.46 9.96 68.58 71 Zoff160883 Ⅲ 9.23 12 035.04 102 21.57 34.31 44.12 72 Zoff184272 Ⅲ 9.35 24 075.94 215 26.51 16.28 57.21 73 Zoff188162 Ⅲ 9.89 27 125.18 243 21.81 10.29 67.90 74 Zoff196199 Ⅲ 5.96 39 530.50 355 16.90 9.86 73.24 75 Zoff217771 Ⅲ 6.23 32 122.87 290 13.45 13.79 72.76 76 Zoff254593 Ⅲ 8.79 20 719.11 183 3.28 19.13 77.60 77 Zoff301103 Ⅲ 5.68 24 958.96 224 4.91 15.18 79.91 78 Zoff554263 Ⅲ 9.79 11 591.13 104 30.77 8.65 60.58