基于转录组测序揭示玉米抗倒伏相关基因和代谢通路

刘松涛, 田再民, 刘子刚, 高志佳, 张静, 贺东刚, 黄智鸿, 兰鑫

Transcriptomic Analysis to Reveal Lodging Resistance Genes and Metabolism Pathways in Maize (Zea mays L.)

Liu Songtao, Tian Zaimin, Liu Zigang, Gao Zhijia, Zhang Jing, He Donggang, Huang Zhihong, Lan Xin

表2 转录组测序数据统计

Table 2 The summary of RNA-Seq data

样品名称 Sample name 原始数据 Raw read 有效数据 Clean read 碱基所占百分比 Q30(%) GC含量 GC content(%) 单一比对率 Unique mapped 多比对率 Multi mapped JNK728-1 46743554 44778802 94.64 53.21 38131199(85.15%) 2833048(3.58%) JNK728-2 42213792 40278042 93.90 53.24 34173234(84.84%) 2543399(3.56%) JNK728-3 45140086 42175780 94.60 53.16 35820137(84.93%) 2740012(3.64%) JN738-1 45628206 43858376 94.36 53.69 38079538(86.82%) 2519952(3.37%) JN738-2 49113472 46927518 94.46 53.78 40671536(86.67%) 2782255(3.41%) JN738-3 47537856 45732776 93.90 53.72 39628836(86.65%) 2690579(3.43%) XY335-1 45920308 44134008 94.30 54.57 38518679(87.28%) 2222552(3.04%) XY335-2 44670476 42529790 94.55 54.84 37079717(87.19%) 2186084(3.04%) XY335-3 46723572 44596496 94.02 55.08 38796470(86.99%) 2319389(3.06%)