Crops ›› 2016, Vol. 32 ›› Issue (4): 15-19.doi: 10.16035/j.issn.1001-7283.2016.04.003

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Research Advances in the Molecular Mechanism of Cold Tolerance of Dongxiang Common Wild Rice (Oryza rufipogon Griff.)

Chen Mingliang,Chen Dazhou,Hu Lanxiang,Wu Xiaoyan,Xiong Huanjin,Xiao Yeqing   

  1. Rice Institute,Jiangxi Academy of Agricultural Sciences,Nanchang 330200,Jiangxi,China
  • Received:2016-04-05 Revised:2016-07-04 Online:2016-08-15 Published:2018-08-26
  • Contact: Yeqing Xiao

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Abstract:

Dongxiang wild rice is the northernmost spread common wild rice in the world. It has strong cold tolerance, and high value for breeding utilization. With the completion of rice genome sequencing, the molecular mechanism of cold tolerance of Dongxiang wild rice has been made a preliminary study. This paper briefly summarized the study progress of Dongxiang common wild rice in recent years, aiming to provide useful help for in-depth research.

Key words: Dongxiang common wild rice, Cold tolerance, Molecular mechanism

Table 1

The cold tolerant QTLs in Dongxiang wild rice"

群体亲本
Population parents		 数量性状遗传位点
QTL		 染色体
Chromosome		 区间
Marker interval		 贡献率（%）
R2		 文献
Reference
协青早B/东野 qCT-4 4 RM127-RG620 16.7 [4,7]
Xieqingzao B/Dongye qCT-8 8 RM210-RM256 17.3
qSCT-1 1 RM246-RM1095 53.3 [6]
qSCT-12 12 RM519-RM270 12.1
qSCT-4 4 S47M 1.6
协青早B/东野和赣早籼49/东野 qCTS2.1 2 MKI178244-MKI192291 18.5 [8]
Xieqingzao B/Dongye and qCTS2.2 2 MKI164548-MKI185933 14.4
Ganzaoxian 49/Dongye qCTS3.1 3 MKI160280-MKI137366 17.6
qCTS3.2 3 MKI152400-MKI132765 18.6
qCTS3.3 3 MKI149624-MKI137032 18.7
qCTS7.1 7 MKI89914-MKI84046 15.5~27.0
qCTS7.2 7 MKI80004-MKI80344 13.8~20.4
qCTS7.3 7 MKI85382-MKI81257 18.7
qCTS8 8 MKI36963-MKI25274 16.1
qCTS9 9 MKI199034-MKI197599 17.3~35.7
qCTS11.1 11 MKI288304-MKI295085 18.5
qCTS11.2 11 MKI293906-MKI288911 14.5
qCTS12.1 12 MKI240278-MKI253183 18.2~19.7
qCTS12.2 12 MKI244291-MKI238924 17.0~30.2
qCTS12.3 12 MKI238050-MKI251857 22.9~29.7
桂朝2号/东野 RLT1-1 1 RM81A 7.0 [9]
Guichao 2/Dongye qRLT6-1 6 RM204 4.0
qCST1-1 1 RM1282-RM3426 12.0 [11]
qCST1-2 1 RM1-RM220 8.0
qCTS2 2 RM341-RM6318 20.0
qCTS5 5 RM305-RM3620 8.0
qCTS6 6 RM162-RM340 8.0
qCTS7 7 RM6081-RM3826 12.0
qCTS10 10 OSR33 12.0
qLTTB3.1 3 RM232-RM251 4.0 [10]
qLTTB8 8 RM331-RM44 4.0
东野/93-11 qSCR3 3 RM282-RM411 16.3 [12]
Dongye/93-11 qSCR11 11 RM167-RM202 19.2
南京11/东野 qLOP2 2 RM221-RS8 10.1 [15]
Nanjing 11/Dongye qRC10-1 10 RM171-RM1108 34.1 [13-14]
qRC10-2 10 RM25570-RM304 37.0

Table 2

The cold tolerant genes in Dongxiang wild rice"

基因
Gene		 染色体
Chromosome		 位点
Locus		 鉴定方法
Identification method		 编码蛋白
Coding protein		 文献
Reference
Cold1 4 LOC_Os04g51180 基因型分析 G蛋白调节因子 [16]
LTT7 7 LOC_Os07g22494 芯片表达分析 功能未知表达蛋白 [11]
BHLH1 7 LOC_Os07g43530 同源克隆 碱性螺旋-环-螺旋蛋白 [17]
[1] 陈大洲, 陈泰林, 邹宏海 , 等. 东乡野生稻的研究与利用. 江西农业学报, 2002,14(4):51-58.
[2] 陈大洲, 肖叶青, 赵社香 , 等. 东乡野生稻苗期和穗期的耐寒性研究. 江西农业学报, 1996,8(1):1-6.
[3] 庞汉华 . 中国野生稻优异种质资源的概况.中国优异稻种资源.北京: 中国农业出版社, 1997: 37-40.
[4] 陈大洲, 钟平安, 肖叶青 , 等. 利用SSR标记定位东乡野生稻苗期耐冷性基因. 江西农业大学, 2002,24(6):753-756.
[5] 王尚明, 贺浩华, 肖叶青 , 等. 水稻东野1号苗期耐冷性遗传分析. 湖北农业科学, 2008,47(1):1-4.
[6] 简水溶, 万勇, 罗向东 , 等. 东乡野生稻苗期耐冷性的遗传分析. 植物学报, 2011,46(1):21-27.
doi: 10.3724/SP.J.1259.2011.00021
[7] 张成良, 姜伟, 肖叶青 , 等. 东乡野生稻耐寒性研究现状与展望. 种子, 2006,25(10):44-47.
[8] Mao D, Yu L, Chen D , et al. Multiple cold resistance loci confer the high cold tolerance adaptation of Dongxiang wild rice (Oryza rufipogon) to its high-latitude habitat. Theoretical & Applied Genetics, 2015,128(7):1359-1371.
[9] 刘凤霞, 孙传清, 谭禄宾 , 等. 江西东乡野生稻孕穗开花期耐冷基因定位. 科学通报, 2003,48(17):1864-1867.
[10] Zhao J, Qin J, Song Q , et al. (JIA2015-0966)Combining QTL mapping and expression profile analysis to identify candidate genes of cold tolerance from Dongxiang common wild rice (Oryza rufipogon Griff.).European Journal of Mechanics-A/Solids, 2015,55:256-277.
[11] Liu E, Xu W, Song Q , et al. Microarray-assisted fine-mapping of quantitative trait loci for cold tolerance in rice. Molecular Plant, 2013,6(3):757-767.
doi: 10.1093/mp/sss161
[12] 左佳, 高婧, 贺荣华 , 等. 东乡野生稻苗期抗寒性QTL的初步定位. 杂交水稻, 2012,27(3):56-59.
[13] 夏瑞祥, 肖宁, 洪义欢 , 等. 东乡野生稻苗期耐冷性的QTL定位. 中国农业科学, 2010,43(3):443-451.
[14] Ning X, Wei N H, Xiao X Z , et al. Fine mapping of qRC10-2,a quantitative trait locus for cold tolerance of rice roots at seedling and mature stages. Plos One, 2014,9(5):e96046.
doi: 10.1371/journal.pone.0096046
[15] Xiao N, Huang W N, Li A H , et al. Fine mapping of the qLOP2 and qPSR2-1 loci associated with chilling stress tolerance of wild rice seedlings. Theoretical & Applied Genetics, 2014,128(1):1-13.
[16] Wang Y J, Zhang Z G, He X J , et al. A rice transcription factor OsbHLH1 is involved in cold stress response. Theoretical & Applied Genetics, 2003,107(8):743-749.
[17] Ma Y, Dai X, Xu Y , et al. COLD1 confers chilling tolerance in rice. Cell, 2015,160(6):1209-1221.
doi: 10.1016/j.cell.2015.01.046
[18] 贺荣华 .冷胁迫下东乡野生稻表达谱测序分析. 长沙:中南大学, 2012.
[19] 沈春修, 李丁, 夏玉梅 , 等. 冷胁迫条件下东乡野生稻中高表达基因位点BGIOSGA004402的氨基酸序列分析. 杂交水稻, 2015,30(1):64-67.
[20] 崔丰磊 .东乡野生稻冷胁迫应答microRNA的筛选及验证. 南昌:江西师范大学, 2015.
[21] 陈雅玲, 罗向东, 张帆涛 , 等. 东乡野生稻基因渐渗系中逆转座子逆转录酶序列的克隆及表达分析. 植物学报, 2013,48(2):138-144.
doi: 10.3724/SP.J.1259.2013.00138
[22] Dai L F, Chen Y L, Luo X D , et al. Level and pattern of DNA methylation changes in rice cold tolerance introgression lines derived from Oryza rufipogon Griff. Euphytica, 2015,205(1):73-83.
doi: 10.1007/s10681-015-1389-0
[23] Xuehui H, Nori K, Xinghua W , et al. A map of rice genome variation reveals the origin of cultivated rice. Nature, 2012,490(7421):497-501.
doi: 10.1038/nature11532
[24] 林张翔, 王营营, 付菲 , 等. 东乡野生稻叶绿体基因组拼接及系统进化分析. 浙江大学学报(农业与生命科学版), 2014,40(4):397-403.
doi: 10.3785/j.issn.1008-9209.2014.04.101
[25] Qi Z, Chen Q, Wang S , et al. Rice and cold stress:methods for its evaluation and summary of cold tolerance-related quantitative trait loci. Rice, 2014,7(1):1-12.
doi: 10.1186/1939-8433-7-1
[26] 刘涛, 王敬国, 刘化龙 , 等.水稻苗期耐冷QTL的图谱整合.作物杂志,2010(3):15-19.
[27] 何光存, 周一强 . 东乡野生稻(Oryza rufipogon)在武汉地区越冬性能的观察. 武汉大学学报(自然科学版), 1996,42(2):252-254.
[28] 肖叶青, 吴小燕, 胡兰香 , 等. 赣香B近等基因导入系构建与目标性状筛选. 分子植物育种, 2010,8(6):1128-1132.
[29] 陈大洲, 肖叶青, 皮勇华 , 等. 东乡野生稻耐冷性的遗传改良初步研究. 江西农业大学学报, 2003,25(1):8-11.
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